Alignment of alleles: Common carp (Cyprinus carpio) IGIV1S20

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20
                                 S   H   E   E   V   Q   C   P   E   F   L   S   V   K   A   G   E   S   V   S
  AB073334,IGIV1S20*01          TCT CAT GAA GAG GTT CAG TGT CCT GAG TTT TTG TCT GTT AAA GCA GGA GAA TCT GTC TCT

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40
                                 I   S   C   T   G   T   S   G   V   D   D   Y                           M   S
  AB073334,IGIV1S20*01          ATC AGC TGC ACT GGG ACC AGC GGA GTT GAT GAT TAC ... ... ... ... ... ... ATG AGC

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60
                                 W   Y   L   Q   K   P   G   E   A   P   K   L   Q   I   Y   K   A   S
  AB073334,IGIV1S20*01          TGG TAT CTG CAG AAA CCT GGA GAA GCT CCT AAA CTC CAG ATC TAC AAA GCC AGT ... ...

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80
                                                     R   L   Q   S   G   V   P       D   R   F   S   G   T   Y
  AB073334,IGIV1S20*01          ... ... ... ... ... CGA CTT CAG TCT GGA GTC CCA ... GAT CGG TTC AGT GGA ACT TAT

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                         S   G   Y   V   F   T   L   N   I   R   G   V   Q   S   E   D   A   G
  AB073334,IGIV1S20*01          ... ... TCT GGA TAT GTA TTT ACA CTG AAC ATA CGT GGA GTC CAG TCT GAG GAT GCA GGA

                                                _______CDR3-IMGT____________
                                101 102 103 104 105 106 107 108 109 110 111
                                 V   Y   Y   C   M   G   A   Y   S   G   G
  AB073334,IGIV1S20*01          GTT TAT TAC TGT ATG GGG GCT TAC AGT GGT GGA  #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 15/04/2003
Author: Nathalie Bosc